Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpap1Q80TE0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Gm37153-201ENSMUST00000193637 231 ntBASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpap1Q80TE0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm4609-201ENSMUST00000106443 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm5138-201ENSMUST00000113842 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm15191-201ENSMUST00000117933 1000 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm12182-201ENSMUST00000118655 1008 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm13882-201ENSMUST00000120886 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm10284-201ENSMUST00000145057 1005 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm10481-201ENSMUST00000179228 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm2574-201ENSMUST00000181051 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm3200-201ENSMUST00000181493 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm8825-201ENSMUST00000182565 998 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm4518-201ENSMUST00000182638 718 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm8330-201ENSMUST00000182754 1008 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm4575-201ENSMUST00000182991 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm8709-201ENSMUST00000183230 1012 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm10293-201ENSMUST00000076317 1002 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gm6316-201ENSMUST00000082064 1020 ntBASIC25.16■■□□□ 1.62
Rpap1Q80TE0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Rpap1Q80TE0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rpap1Q80TE0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rpap1Q80TE0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rpap1Q80TE0 Gm8396-201ENSMUST00000057361 823 ntBASIC25.14■■□□□ 1.62
Rpap1Q80TE0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Rpap1Q80TE0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rpap1Q80TE0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Gm13597-201ENSMUST00000121239 375 ntBASIC25.13■■□□□ 1.61
Rpap1Q80TE0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms