Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Gm15467-201ENSMUST00000120582 445 ntBASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38bQ80SY5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38bQ80SY5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38bQ80SY5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38bQ80SY5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Prpf38bQ80SY5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38bQ80SY5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Gm12350-201ENSMUST00000121208 462 ntBASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38bQ80SY5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17■□□□□ 0.31
Prpf38bQ80SY5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Gm6376-201ENSMUST00000209407 580 ntBASIC17■□□□□ 0.31
Prpf38bQ80SY5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17■□□□□ 0.31
Prpf38bQ80SY5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38bQ80SY5 Gm19721-201ENSMUST00000195284 1764 ntBASIC17■□□□□ 0.31
Prpf38bQ80SY5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms