Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim46Q7TNM2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trim46Q7TNM2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim46Q7TNM2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim46Q7TNM2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim46Q7TNM2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Gm11355-201ENSMUST00000121120 306 ntBASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim46Q7TNM2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim46Q7TNM2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Gm37722-201ENSMUST00000193757 208 ntBASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim46Q7TNM2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim46Q7TNM2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms