Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dhx40Q6PE54 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dhx40Q6PE54 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dhx40Q6PE54 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dhx40Q6PE54 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Dhx40Q6PE54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Dhx40Q6PE54 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Timm23-208ENSMUST00000226683 750 ntBASIC18.14■□□□□ 0.49
Dhx40Q6PE54 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dhx40Q6PE54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Gm715-201ENSMUST00000117865 831 ntBASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dhx40Q6PE54 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dhx40Q6PE54 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms