Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Mir5133-201ENSMUST00000174955 77 ntBASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Gm27405-201ENSMUST00000184201 112 ntBASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf220Q6PDX6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Mir2861-201ENSMUST00000175539 82 ntBASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf220Q6PDX6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.52■□□□□ 0.07
Rnf220Q6PDX6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf220Q6PDX6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf220Q6PDX6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms