Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tff3Q62395 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.13□□□□□ -0.15
Tff3Q62395 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Gm44454-201ENSMUST00000198541 138 ntBASIC14.13□□□□□ -0.15
Tff3Q62395 Gm44771-201ENSMUST00000206975 626 ntBASIC14.13□□□□□ -0.15
Tff3Q62395 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.13□□□□□ -0.15
Tff3Q62395 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.13□□□□□ -0.15
Tff3Q62395 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tff3Q62395 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.13□□□□□ -0.15
Tff3Q62395 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.13□□□□□ -0.15
Tff3Q62395 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Tff3Q62395 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.12□□□□□ -0.15
Tff3Q62395 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Tff3Q62395 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.12□□□□□ -0.15
Tff3Q62395 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tff3Q62395 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tff3Q62395 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff3Q62395 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tff3Q62395 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.11□□□□□ -0.15
Tff3Q62395 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Tff3Q62395 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Tff3Q62395 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.11□□□□□ -0.15
Tff3Q62395 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.11□□□□□ -0.15
Tff3Q62395 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.11□□□□□ -0.15
Tff3Q62395 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.11□□□□□ -0.15
Tff3Q62395 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tff3Q62395 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff3Q62395 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tff3Q62395 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Tff3Q62395 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Tff3Q62395 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.1□□□□□ -0.15
Tff3Q62395 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff3Q62395 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms