Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Gm27397-201ENSMUST00000184997 107 ntBASIC18.03■□□□□ 0.48
Ecm1Q61508 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ecm1Q61508 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.03■□□□□ 0.48
Ecm1Q61508 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Gm11764-201ENSMUST00000120221 623 ntBASIC18.02■□□□□ 0.48
Ecm1Q61508 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.02■□□□□ 0.48
Ecm1Q61508 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ecm1Q61508 Gm10175-201ENSMUST00000086013 645 ntBASIC18.02■□□□□ 0.48
Ecm1Q61508 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ecm1Q61508 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ecm1Q61508 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ecm1Q61508 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm14822-201ENSMUST00000122247 291 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm8825-201ENSMUST00000182565 998 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm4518-201ENSMUST00000182638 718 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.01■□□□□ 0.47
Ecm1Q61508 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ecm1Q61508 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.01■□□□□ 0.47
Ecm1Q61508 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ecm1Q61508 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ecm1Q61508 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
Ecm1Q61508 Gm5682-201ENSMUST00000173402 505 ntBASIC18■□□□□ 0.47
Ecm1Q61508 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18■□□□□ 0.47
Ecm1Q61508 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18■□□□□ 0.47
Ecm1Q61508 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ecm1Q61508 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ecm1Q61508 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ecm1Q61508 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms