Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.35□□□□□ -0.11
DhhQ61488 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.35□□□□□ -0.11
DhhQ61488 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.35□□□□□ -0.11
DhhQ61488 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.35□□□□□ -0.11
DhhQ61488 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhhQ61488 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.34□□□□□ -0.11
DhhQ61488 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.34□□□□□ -0.11
DhhQ61488 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Gm5587-201ENSMUST00000206270 674 ntBASIC14.34□□□□□ -0.11
DhhQ61488 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DhhQ61488 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.34□□□□□ -0.11
DhhQ61488 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.34□□□□□ -0.11
DhhQ61488 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhhQ61488 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DhhQ61488 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DhhQ61488 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
DhhQ61488 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.33□□□□□ -0.12
DhhQ61488 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DhhQ61488 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhhQ61488 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Mir770-201ENSMUST00000103252 94 ntBASIC14.32□□□□□ -0.12
DhhQ61488 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.32□□□□□ -0.12
DhhQ61488 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DhhQ61488 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.32□□□□□ -0.12
DhhQ61488 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DhhQ61488 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhhQ61488 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DhhQ61488 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DhhQ61488 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DhhQ61488 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms