Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.09■□□□□ 0.49
Ift88Q61371 Gm27463-201ENSMUST00000183569 57 ntBASIC18.09■□□□□ 0.49
Ift88Q61371 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.09■□□□□ 0.49
Ift88Q61371 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.09■□□□□ 0.49
Ift88Q61371 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ift88Q61371 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.09■□□□□ 0.49
Ift88Q61371 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.08■□□□□ 0.49
Ift88Q61371 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Ift88Q61371 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.08■□□□□ 0.49
Ift88Q61371 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Ift88Q61371 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ift88Q61371 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ift88Q61371 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ift88Q61371 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.08■□□□□ 0.48
Ift88Q61371 Gm21814-202ENSMUST00000203277 873 ntBASIC18.08■□□□□ 0.48
Ift88Q61371 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.08■□□□□ 0.48
Ift88Q61371 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ift88Q61371 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.08■□□□□ 0.48
Ift88Q61371 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.07■□□□□ 0.48
Ift88Q61371 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ift88Q61371 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ift88Q61371 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ift88Q61371 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ift88Q61371 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ift88Q61371 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.07■□□□□ 0.48
Ift88Q61371 Gm8520-201ENSMUST00000186517 868 ntBASIC18.07■□□□□ 0.48
Ift88Q61371 Gm18115-201ENSMUST00000221209 621 ntBASIC18.07■□□□□ 0.48
Ift88Q61371 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Ift88Q61371 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ift88Q61371 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ift88Q61371 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.07■□□□□ 0.48
Ift88Q61371 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ift88Q61371 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.06■□□□□ 0.48
Ift88Q61371 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Ift88Q61371 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.06■□□□□ 0.48
Ift88Q61371 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.06■□□□□ 0.48
Ift88Q61371 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.06■□□□□ 0.48
Ift88Q61371 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ift88Q61371 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.05■□□□□ 0.48
Ift88Q61371 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Gm11539-201ENSMUST00000119837 557 ntBASIC18.05■□□□□ 0.48
Ift88Q61371 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.05■□□□□ 0.48
Ift88Q61371 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.05■□□□□ 0.48
Ift88Q61371 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms