Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.66□□□□□ -0.22
Hcfc1Q61191 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Hcfc1Q61191 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hcfc1Q61191 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.66□□□□□ -0.22
Hcfc1Q61191 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hcfc1Q61191 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hcfc1Q61191 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Hcfc1Q61191 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
Hcfc1Q61191 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hcfc1Q61191 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Rarb-207ENSMUST00000225921 2756 ntBASIC13.64□□□□□ -0.23
Hcfc1Q61191 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Hcfc1Q61191 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm13597-201ENSMUST00000121239 375 ntBASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.63□□□□□ -0.23
Hcfc1Q61191 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm17968-201ENSMUST00000194902 784 ntBASIC13.63□□□□□ -0.23
Hcfc1Q61191 Gm5312-201ENSMUST00000203728 547 ntBASIC13.63□□□□□ -0.23
Hcfc1Q61191 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hcfc1Q61191 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms