Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Irf9Q61179 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Irf9Q61179 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.27■□□□□ 0.84
Irf9Q61179 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.27■□□□□ 0.84
Irf9Q61179 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Irf9Q61179 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf9Q61179 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Irf9Q61179 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Irf9Q61179 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Irf9Q61179 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Irf9Q61179 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Irf9Q61179 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Irf9Q61179 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Irf9Q61179 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.26■□□□□ 0.83
Irf9Q61179 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf9Q61179 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.26■□□□□ 0.83
Irf9Q61179 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Gm7862-201ENSMUST00000121461 292 ntBASIC20.25■□□□□ 0.83
Irf9Q61179 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Irf9Q61179 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.25■□□□□ 0.83
Irf9Q61179 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.25■□□□□ 0.83
Irf9Q61179 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.25■□□□□ 0.83
Irf9Q61179 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf9Q61179 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Irf9Q61179 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Irf9Q61179 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.24■□□□□ 0.83
Irf9Q61179 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Irf9Q61179 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.24■□□□□ 0.83
Irf9Q61179 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Irf9Q61179 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Irf9Q61179 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.24■□□□□ 0.83
Irf9Q61179 Gm25406-201ENSMUST00000157599 105 ntBASIC20.24■□□□□ 0.83
Irf9Q61179 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Mir6404-201ENSMUST00000183699 94 ntBASIC20.24■□□□□ 0.83
Irf9Q61179 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Irf9Q61179 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf9Q61179 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.23■□□□□ 0.83
Irf9Q61179 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Irf9Q61179 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.23■□□□□ 0.83
Irf9Q61179 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Irf9Q61179 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.23■□□□□ 0.83
Irf9Q61179 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.23■□□□□ 0.83
Irf9Q61179 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.23■□□□□ 0.83
Irf9Q61179 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf9Q61179 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Irf9Q61179 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.22■□□□□ 0.83
Irf9Q61179 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.22■□□□□ 0.83
Irf9Q61179 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms