Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.33■□□□□ 0.37
Shroom1Q5SX79 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom1Q5SX79 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom1Q5SX79 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Gm12644-201ENSMUST00000119935 606 ntBASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Gm43514-201ENSMUST00000198852 424 ntBASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom1Q5SX79 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom1Q5SX79 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Gm6443-201ENSMUST00000203599 874 ntBASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Gm18195-201ENSMUST00000207604 706 ntBASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Rps4l-201ENSMUST00000071745 943 ntBASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom1Q5SX79 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms