Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Scn2bQ56A07 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Gm2274-201ENSMUST00000184539 609 ntBASIC16.17■□□□□ 0.18
Scn2bQ56A07 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scn2bQ56A07 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.16■□□□□ 0.18
Scn2bQ56A07 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Scn2bQ56A07 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.16■□□□□ 0.18
Scn2bQ56A07 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn2bQ56A07 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.16■□□□□ 0.18
Scn2bQ56A07 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Scn2bQ56A07 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Gm13186-201ENSMUST00000118031 316 ntBASIC16.15■□□□□ 0.18
Scn2bQ56A07 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Gm9987-201ENSMUST00000069768 567 ntBASIC16.15■□□□□ 0.18
Scn2bQ56A07 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn2bQ56A07 Phf7-203ENSMUST00000226565 1971 ntBASIC16.15■□□□□ 0.18
Scn2bQ56A07 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
Scn2bQ56A07 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Scn2bQ56A07 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms