Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srrm1Q52KI8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Gm4459-201ENSMUST00000118750 468 ntBASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.27■□□□□ 0.52
Srrm1Q52KI8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srrm1Q52KI8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.27■□□□□ 0.51
Srrm1Q52KI8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Srrm1Q52KI8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Srrm1Q52KI8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Gm10175-201ENSMUST00000086013 645 ntBASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm1Q52KI8 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.25■□□□□ 0.51
Srrm1Q52KI8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm1Q52KI8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srrm1Q52KI8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.23■□□□□ 0.51
Srrm1Q52KI8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.23■□□□□ 0.51
Srrm1Q52KI8 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm1Q52KI8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms