Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm15427-201ENSMUST00000117288 531 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm11745-201ENSMUST00000121669 448 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm44335-201ENSMUST00000196879 141 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm44297-201ENSMUST00000198304 141 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm44346-201ENSMUST00000198851 141 ntBASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Gm45747-201ENSMUST00000212203 999 ntBASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank3Q4ACU6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm4518-201ENSMUST00000182638 718 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank3Q4ACU6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Gm43125-201ENSMUST00000201724 730 ntBASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Gm5312-201ENSMUST00000203728 547 ntBASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Gm44872-201ENSMUST00000207864 420 ntBASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank3Q4ACU6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Shank3Q4ACU6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms