Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gm33142-201ENSMUST00000193913 867 ntBASIC12.63□□□□□ -0.39
Cdx4Q07424 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.63□□□□□ -0.39
Cdx4Q07424 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx4Q07424 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx4Q07424 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdx4Q07424 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Mir1668-201ENSMUST00000184114 107 ntBASIC12.62□□□□□ -0.39
Cdx4Q07424 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.62□□□□□ -0.39
Cdx4Q07424 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdx4Q07424 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx4Q07424 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.62□□□□□ -0.39
Cdx4Q07424 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.61□□□□□ -0.39
Cdx4Q07424 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Gm7213-201ENSMUST00000215977 950 ntBASIC12.61□□□□□ -0.39
Cdx4Q07424 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms