Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.98□□□□□ -0.49
Hspg2Q05793 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.98□□□□□ -0.49
Hspg2Q05793 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.98□□□□□ -0.49
Hspg2Q05793 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hspg2Q05793 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hspg2Q05793 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Gm12428-201ENSMUST00000119844 727 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hspg2Q05793 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hspg2Q05793 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.97□□□□□ -0.49
Hspg2Q05793 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Gm8655-201ENSMUST00000221159 852 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Hspg2Q05793 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Gm14127-201ENSMUST00000117906 678 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.97□□□□□ -0.49
Hspg2Q05793 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hspg2Q05793 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hspg2Q05793 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.96□□□□□ -0.49
Hspg2Q05793 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.96□□□□□ -0.49
Hspg2Q05793 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hspg2Q05793 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.96□□□□□ -0.49
Hspg2Q05793 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hspg2Q05793 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.96□□□□□ -0.49
Hspg2Q05793 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hspg2Q05793 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.96□□□□□ -0.5
Hspg2Q05793 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.96□□□□□ -0.5
Hspg2Q05793 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms