Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Mir8117-201ENSMUST00000184773 107 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.37■□□□□ 0.85
Smarcc1P97496 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.37■□□□□ 0.85
Smarcc1P97496 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc1P97496 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcc1P97496 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc1P97496 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Gm36967-201ENSMUST00000193814 266 ntBASIC20.36■□□□□ 0.85
Smarcc1P97496 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.36■□□□□ 0.85
Smarcc1P97496 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcc1P97496 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc1P97496 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc1P97496 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc1P97496 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc1P97496 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc1P97496 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.35■□□□□ 0.85
Smarcc1P97496 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.35■□□□□ 0.85
Smarcc1P97496 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.35■□□□□ 0.85
Smarcc1P97496 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smarcc1P97496 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.35■□□□□ 0.85
Smarcc1P97496 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.35■□□□□ 0.85
Smarcc1P97496 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc1P97496 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.34■□□□□ 0.85
Smarcc1P97496 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcc1P97496 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Smarcc1P97496 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc1P97496 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smarcc1P97496 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc1P97496 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc1P97496 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Smarcc1P97496 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc1P97496 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc1P97496 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.33■□□□□ 0.85
Smarcc1P97496 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Smarcc1P97496 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc1P97496 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc1P97496 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc1P97496 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms