Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SgcaP82350 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SgcaP82350 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Gm18284-201ENSMUST00000172604 624 ntBASIC13.73□□□□□ -0.21
SgcaP82350 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.73□□□□□ -0.21
SgcaP82350 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SgcaP82350 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.73□□□□□ -0.21
SgcaP82350 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SgcaP82350 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.72□□□□□ -0.21
SgcaP82350 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.72□□□□□ -0.21
SgcaP82350 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Gm10138-203ENSMUST00000206952 366 ntBASIC13.72□□□□□ -0.21
SgcaP82350 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SgcaP82350 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.72□□□□□ -0.21
SgcaP82350 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.72□□□□□ -0.21
SgcaP82350 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SgcaP82350 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SgcaP82350 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SgcaP82350 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.72□□□□□ -0.21
SgcaP82350 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcaP82350 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.71□□□□□ -0.21
SgcaP82350 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SgcaP82350 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SgcaP82350 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.71□□□□□ -0.21
SgcaP82350 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.71□□□□□ -0.21
SgcaP82350 Gm5408-201ENSMUST00000197998 747 ntBASIC13.71□□□□□ -0.21
SgcaP82350 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.71□□□□□ -0.21
SgcaP82350 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.71□□□□□ -0.21
SgcaP82350 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcaP82350 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
SgcaP82350 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SgcaP82350 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcaP82350 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcaP82350 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcaP82350 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
SgcaP82350 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.71□□□□□ -0.22
SgcaP82350 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SgcaP82350 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SgcaP82350 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Gm15375-201ENSMUST00000119510 849 ntBASIC13.7□□□□□ -0.22
SgcaP82350 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SgcaP82350 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SgcaP82350 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms