Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.56□□□□□ -0.08
SgcbP82349 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.56□□□□□ -0.08
SgcbP82349 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.56□□□□□ -0.08
SgcbP82349 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SgcbP82349 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SgcbP82349 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.56□□□□□ -0.08
SgcbP82349 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.56□□□□□ -0.08
SgcbP82349 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SgcbP82349 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SgcbP82349 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SgcbP82349 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SgcbP82349 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SgcbP82349 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.55□□□□□ -0.08
SgcbP82349 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SgcbP82349 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SgcbP82349 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.55□□□□□ -0.08
SgcbP82349 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Gm10052-201ENSMUST00000168019 960 ntBASIC14.55□□□□□ -0.08
SgcbP82349 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.55□□□□□ -0.08
SgcbP82349 Gm7729-201ENSMUST00000050143 801 ntBASIC14.55□□□□□ -0.08
SgcbP82349 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.55□□□□□ -0.08
SgcbP82349 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SgcbP82349 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcbP82349 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.54□□□□□ -0.08
SgcbP82349 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SgcbP82349 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SgcbP82349 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.54□□□□□ -0.08
SgcbP82349 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.54□□□□□ -0.08
SgcbP82349 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcbP82349 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.54□□□□□ -0.08
SgcbP82349 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SgcbP82349 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms