Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ufd1P70362 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.07□□□□□ -0.16
Ufd1P70362 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.07□□□□□ -0.16
Ufd1P70362 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.07□□□□□ -0.16
Ufd1P70362 Gm6576-201ENSMUST00000169678 883 ntBASIC14.07□□□□□ -0.16
Ufd1P70362 Gm44549-201ENSMUST00000208351 577 ntBASIC14.07□□□□□ -0.16
Ufd1P70362 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ufd1P70362 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ufd1P70362 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ufd1P70362 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ufd1P70362 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ufd1P70362 Prob1-201ENSMUST00000097619 3021 ntBASIC14.07□□□□□ -0.16
Ufd1P70362 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.07□□□□□ -0.16
Ufd1P70362 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.06□□□□□ -0.16
Ufd1P70362 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.06□□□□□ -0.16
Ufd1P70362 Gm7291-201ENSMUST00000199147 382 ntBASIC14.06□□□□□ -0.16
Ufd1P70362 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.06□□□□□ -0.16
Ufd1P70362 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.06□□□□□ -0.16
Ufd1P70362 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ufd1P70362 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.06□□□□□ -0.16
Ufd1P70362 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.05□□□□□ -0.16
Ufd1P70362 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.05□□□□□ -0.16
Ufd1P70362 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.05□□□□□ -0.16
Ufd1P70362 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.05□□□□□ -0.16
Ufd1P70362 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ufd1P70362 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ufd1P70362 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ufd1P70362 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.04□□□□□ -0.16
Ufd1P70362 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms