Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.6□□□□□ -0.23
Pdlim4P70271 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim4P70271 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim4P70271 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pdlim4P70271 AA414768-201ENSMUST00000121924 1257 ntBASIC13.59□□□□□ -0.23
Pdlim4P70271 Gm9013-201ENSMUST00000132939 882 ntBASIC13.59□□□□□ -0.23
Pdlim4P70271 Gm25016-201ENSMUST00000158399 131 ntBASIC13.59□□□□□ -0.23
Pdlim4P70271 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pdlim4P70271 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.59□□□□□ -0.23
Pdlim4P70271 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pdlim4P70271 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pdlim4P70271 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim4P70271 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim4P70271 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.58□□□□□ -0.23
Pdlim4P70271 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim4P70271 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim4P70271 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim4P70271 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim4P70271 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim4P70271 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pdlim4P70271 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pdlim4P70271 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.58□□□□□ -0.24
Pdlim4P70271 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.58□□□□□ -0.24
Pdlim4P70271 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.58□□□□□ -0.24
Pdlim4P70271 Gm37722-201ENSMUST00000193757 208 ntBASIC13.58□□□□□ -0.24
Pdlim4P70271 Gm7977-201ENSMUST00000193787 748 ntBASIC13.58□□□□□ -0.24
Pdlim4P70271 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pdlim4P70271 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim4P70271 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.57□□□□□ -0.24
Pdlim4P70271 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms