Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Gm13158-201ENSMUST00000122007 736 ntBASIC16.21■□□□□ 0.19
Crnkl1P63154 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Crnkl1P63154 Asic1-205ENSMUST00000228185 1818 ntBASIC16.21■□□□□ 0.19
Crnkl1P63154 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Crnkl1P63154 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
Crnkl1P63154 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Crnkl1P63154 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Crnkl1P63154 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Crnkl1P63154 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Crnkl1P63154 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Gm38285-201ENSMUST00000192928 922 ntBASIC16.2■□□□□ 0.18
Crnkl1P63154 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Crnkl1P63154 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Crnkl1P63154 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Crnkl1P63154 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Crnkl1P63154 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.19■□□□□ 0.18
Crnkl1P63154 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.19■□□□□ 0.18
Crnkl1P63154 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crnkl1P63154 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.18■□□□□ 0.18
Crnkl1P63154 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.18■□□□□ 0.18
Crnkl1P63154 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Crnkl1P63154 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crnkl1P63154 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms