Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lsm3P62311 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm3P62311 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Lsm3P62311 Gm42778-201ENSMUST00000199644 553 ntBASIC14.99□□□□□ -0.01
Lsm3P62311 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.99□□□□□ -0.01
Lsm3P62311 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lsm3P62311 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm3P62311 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm3P62311 Gm2399-201ENSMUST00000104944 225 ntBASIC14.98□□□□□ -0.01
Lsm3P62311 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm3P62311 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm3P62311 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Asic1-205ENSMUST00000228185 1818 ntBASIC14.98□□□□□ -0.01
Lsm3P62311 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm3P62311 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.97□□□□□ -0.01
Lsm3P62311 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.97□□□□□ -0.01
Lsm3P62311 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm3P62311 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm3P62311 Gm27454-201ENSMUST00000185090 204 ntBASIC14.97□□□□□ -0.01
Lsm3P62311 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm3P62311 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.97□□□□□ -0.01
Lsm3P62311 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lsm3P62311 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm3P62311 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.97□□□□□ -0.01
Lsm3P62311 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm3P62311 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.97□□□□□ -0.01
Lsm3P62311 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm3P62311 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Lsm3P62311 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm3P62311 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Lsm3P62311 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm3P62311 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.96□□□□□ -0.01
Lsm3P62311 Gm13241-201ENSMUST00000094493 780 ntBASIC14.96□□□□□ -0.01
Lsm3P62311 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm3P62311 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm3P62311 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm3P62311 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm3P62311 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.96□□□□□ -0.02
Lsm3P62311 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.95□□□□□ -0.02
Lsm3P62311 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.95□□□□□ -0.02
Lsm3P62311 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms