Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Gm13312-201ENSMUST00000119631 718 ntBASIC20.03■□□□□ 0.8
Tm6sf1P58749 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tm6sf1P58749 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Gm7284-201ENSMUST00000131667 944 ntBASIC20.02■□□□□ 0.8
Tm6sf1P58749 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tm6sf1P58749 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tm6sf1P58749 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tm6sf1P58749 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tm6sf1P58749 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tm6sf1P58749 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tm6sf1P58749 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.01■□□□□ 0.79
Tm6sf1P58749 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.01■□□□□ 0.79
Tm6sf1P58749 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tm6sf1P58749 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Tm6sf1P58749 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Tm6sf1P58749 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20■□□□□ 0.79
Tm6sf1P58749 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20■□□□□ 0.79
Tm6sf1P58749 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20■□□□□ 0.79
Tm6sf1P58749 AC153794.1-201ENSMUST00000169148 126 ntBASIC20■□□□□ 0.79
Tm6sf1P58749 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Tm6sf1P58749 AC114585.2-202ENSMUST00000228094 426 ntBASIC20■□□□□ 0.79
Tm6sf1P58749 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tm6sf1P58749 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20■□□□□ 0.79
Tm6sf1P58749 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.99■□□□□ 0.79
Tm6sf1P58749 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Mir6404-201ENSMUST00000183699 94 ntBASIC19.99■□□□□ 0.79
Tm6sf1P58749 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tm6sf1P58749 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms