Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msh6P54276 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Msh6P54276 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.64■□□□□ 0.89
Msh6P54276 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Msh6P54276 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.64■□□□□ 0.89
Msh6P54276 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.64■□□□□ 0.89
Msh6P54276 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.64■□□□□ 0.89
Msh6P54276 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.64■□□□□ 0.89
Msh6P54276 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.64■□□□□ 0.89
Msh6P54276 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.64■□□□□ 0.89
Msh6P54276 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh6P54276 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Msh6P54276 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Gm8097-201ENSMUST00000117903 829 ntBASIC20.63■□□□□ 0.89
Msh6P54276 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Gm27628-201ENSMUST00000184911 107 ntBASIC20.63■□□□□ 0.89
Msh6P54276 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.63■□□□□ 0.89
Msh6P54276 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh6P54276 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh6P54276 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.62■□□□□ 0.89
Msh6P54276 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Msh6P54276 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.62■□□□□ 0.89
Msh6P54276 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.62■□□□□ 0.89
Msh6P54276 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Msh6P54276 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Msh6P54276 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh6P54276 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Msh6P54276 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Gm4459-201ENSMUST00000118750 468 ntBASIC20.61■□□□□ 0.89
Msh6P54276 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.61■□□□□ 0.89
Msh6P54276 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.61■□□□□ 0.89
Msh6P54276 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.61■□□□□ 0.89
Msh6P54276 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.61■□□□□ 0.89
Msh6P54276 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Msh6P54276 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Msh6P54276 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh6P54276 Gm24513-201ENSMUST00000174964 138 ntBASIC20.6■□□□□ 0.89
Msh6P54276 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh6P54276 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Msh6P54276 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh6P54276 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.59■□□□□ 0.89
Msh6P54276 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.59■□□□□ 0.89
Msh6P54276 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Msh6P54276 Gm10175-201ENSMUST00000086013 645 ntBASIC20.59■□□□□ 0.89
Msh6P54276 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Msh6P54276 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.59■□□□□ 0.89
Msh6P54276 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.59■□□□□ 0.89
Msh6P54276 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh6P54276 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.59■□□□□ 0.89
Msh6P54276 Gm27397-201ENSMUST00000184997 107 ntBASIC20.59■□□□□ 0.89
Msh6P54276 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms