Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.21■□□□□ 0.51
Nek1P51954 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nek1P51954 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.21■□□□□ 0.51
Nek1P51954 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nek1P51954 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nek1P51954 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nek1P51954 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nek1P51954 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Nek1P51954 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.2■□□□□ 0.5
Nek1P51954 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.2■□□□□ 0.5
Nek1P51954 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.2■□□□□ 0.5
Nek1P51954 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.2■□□□□ 0.5
Nek1P51954 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nek1P51954 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.2■□□□□ 0.5
Nek1P51954 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nek1P51954 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
Nek1P51954 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.19■□□□□ 0.5
Nek1P51954 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Nek1P51954 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.19■□□□□ 0.5
Nek1P51954 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Nek1P51954 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.19■□□□□ 0.5
Nek1P51954 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.19■□□□□ 0.5
Nek1P51954 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nek1P51954 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.19■□□□□ 0.5
Nek1P51954 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nek1P51954 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Gm9103-201ENSMUST00000119371 405 ntBASIC18.18■□□□□ 0.5
Nek1P51954 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nek1P51954 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nek1P51954 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.17■□□□□ 0.5
Nek1P51954 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.17■□□□□ 0.5
Nek1P51954 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nek1P51954 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nek1P51954 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.17■□□□□ 0.5
Nek1P51954 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.17■□□□□ 0.5
Nek1P51954 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nek1P51954 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nek1P51954 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nek1P51954 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.16■□□□□ 0.5
Nek1P51954 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nek1P51954 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.16■□□□□ 0.5
Nek1P51954 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.16■□□□□ 0.5
Nek1P51954 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms