Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Brca1P48754 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.24■□□□□ 0.51
Brca1P48754 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Gm17968-201ENSMUST00000194902 784 ntBASIC18.24■□□□□ 0.51
Brca1P48754 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.24■□□□□ 0.51
Brca1P48754 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Brca1P48754 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Brca1P48754 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Brca1P48754 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Mir1895-201ENSMUST00000122615 79 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.23■□□□□ 0.51
Brca1P48754 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.23■□□□□ 0.51
Brca1P48754 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Brca1P48754 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Brca1P48754 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Brca1P48754 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Brca1P48754 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.23■□□□□ 0.51
Brca1P48754 Gm44335-201ENSMUST00000196879 141 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Gm44297-201ENSMUST00000198304 141 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Gm44346-201ENSMUST00000198851 141 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Gm43125-201ENSMUST00000201724 730 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Gm20949-201ENSMUST00000206478 952 ntBASIC18.23■□□□□ 0.51
Brca1P48754 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Brca1P48754 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.23■□□□□ 0.51
Brca1P48754 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Brca1P48754 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.22■□□□□ 0.51
Brca1P48754 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.22■□□□□ 0.51
Brca1P48754 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.22■□□□□ 0.51
Brca1P48754 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.22■□□□□ 0.51
Brca1P48754 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.22■□□□□ 0.51
Brca1P48754 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Brca1P48754 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.21■□□□□ 0.51
Brca1P48754 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm8825-201ENSMUST00000182565 998 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm4518-201ENSMUST00000182638 718 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Mir7023-201ENSMUST00000185093 64 ntBASIC18.21■□□□□ 0.51
Brca1P48754 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Brca1P48754 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms