Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nedd4P46935 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Mir1895-201ENSMUST00000122615 79 ntBASIC19.58■□□□□ 0.72
Nedd4P46935 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nedd4P46935 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd4P46935 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.57■□□□□ 0.72
Nedd4P46935 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.57■□□□□ 0.72
Nedd4P46935 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.57■□□□□ 0.72
Nedd4P46935 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.57■□□□□ 0.72
Nedd4P46935 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd4P46935 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.56■□□□□ 0.72
Nedd4P46935 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nedd4P46935 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.56■□□□□ 0.72
Nedd4P46935 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nedd4P46935 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd4P46935 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.56■□□□□ 0.72
Nedd4P46935 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.55■□□□□ 0.72
Nedd4P46935 Gm4899-201ENSMUST00000178708 719 ntBASIC19.55■□□□□ 0.72
Nedd4P46935 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.55■□□□□ 0.72
Nedd4P46935 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.55■□□□□ 0.72
Nedd4P46935 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.55■□□□□ 0.72
Nedd4P46935 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd4P46935 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nedd4P46935 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Nedd4P46935 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nedd4P46935 Mir7023-201ENSMUST00000185093 64 ntBASIC19.54■□□□□ 0.72
Nedd4P46935 Gm17968-201ENSMUST00000194902 784 ntBASIC19.54■□□□□ 0.72
Nedd4P46935 Gm5312-201ENSMUST00000203728 547 ntBASIC19.54■□□□□ 0.72
Nedd4P46935 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nedd4P46935 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Gm18622-201ENSMUST00000219361 595 ntBASIC19.54■□□□□ 0.72
Nedd4P46935 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.54■□□□□ 0.72
Nedd4P46935 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.54■□□□□ 0.72
Nedd4P46935 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.54■□□□□ 0.72
Nedd4P46935 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd4P46935 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nedd4P46935 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd4P46935 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nedd4P46935 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms