Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Gm2399-201ENSMUST00000104944 225 ntBASIC14.09□□□□□ -0.15
Slc6a1P31648 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.09□□□□□ -0.15
Slc6a1P31648 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc6a1P31648 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.09□□□□□ -0.15
Slc6a1P31648 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc6a1P31648 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc6a1P31648 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.09□□□□□ -0.15
Slc6a1P31648 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.09□□□□□ -0.15
Slc6a1P31648 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.09□□□□□ -0.15
Slc6a1P31648 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.08□□□□□ -0.15
Slc6a1P31648 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.08□□□□□ -0.15
Slc6a1P31648 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.08□□□□□ -0.15
Slc6a1P31648 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc6a1P31648 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.08□□□□□ -0.16
Slc6a1P31648 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.08□□□□□ -0.16
Slc6a1P31648 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.08□□□□□ -0.16
Slc6a1P31648 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc6a1P31648 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Gm5643-201ENSMUST00000117081 966 ntBASIC14.07□□□□□ -0.16
Slc6a1P31648 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.07□□□□□ -0.16
Slc6a1P31648 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.07□□□□□ -0.16
Slc6a1P31648 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc6a1P31648 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc6a1P31648 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.06□□□□□ -0.16
Slc6a1P31648 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms