Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf1bP25119 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gm10052-201ENSMUST00000168019 960 ntBASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gm21362-201ENSMUST00000194272 928 ntBASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gm7729-201ENSMUST00000050143 801 ntBASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf1bP25119 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf1bP25119 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf1bP25119 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Gm27742-201ENSMUST00000184667 60 ntBASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf1bP25119 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms