Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BdnfP21237 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
BdnfP21237 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
BdnfP21237 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.65■□□□□ 0.1
BdnfP21237 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.65■□□□□ 0.1
BdnfP21237 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Gm3375-201ENSMUST00000203929 796 ntBASIC15.65■□□□□ 0.1
BdnfP21237 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.65■□□□□ 0.1
BdnfP21237 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BdnfP21237 Prob1-201ENSMUST00000097619 3021 ntBASIC15.65■□□□□ 0.1
BdnfP21237 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BdnfP21237 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BdnfP21237 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.64■□□□□ 0.09
BdnfP21237 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BdnfP21237 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.64■□□□□ 0.09
BdnfP21237 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.64■□□□□ 0.09
BdnfP21237 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BdnfP21237 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.64■□□□□ 0.09
BdnfP21237 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.64■□□□□ 0.09
BdnfP21237 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.64■□□□□ 0.09
BdnfP21237 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.64■□□□□ 0.09
BdnfP21237 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BdnfP21237 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
BdnfP21237 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BdnfP21237 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.64■□□□□ 0.09
BdnfP21237 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.63■□□□□ 0.09
BdnfP21237 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
BdnfP21237 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BdnfP21237 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.62■□□□□ 0.09
BdnfP21237 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
BdnfP21237 Odf3b-204ENSMUST00000227834 930 ntBASIC15.62■□□□□ 0.09
BdnfP21237 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BdnfP21237 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.62■□□□□ 0.09
BdnfP21237 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BdnfP21237 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BdnfP21237 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
BdnfP21237 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
BdnfP21237 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms