Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxb9P20615 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Gm6345-202ENSMUST00000180900 204 ntBASIC15.68■□□□□ 0.1
Hoxb9P20615 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.68■□□□□ 0.1
Hoxb9P20615 Gm5587-201ENSMUST00000206270 674 ntBASIC15.68■□□□□ 0.1
Hoxb9P20615 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxb9P20615 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxb9P20615 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxb9P20615 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxb9P20615 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxb9P20615 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxb9P20615 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.66■□□□□ 0.1
Hoxb9P20615 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxb9P20615 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxb9P20615 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Gm13836-201ENSMUST00000121159 501 ntBASIC15.65■□□□□ 0.1
Hoxb9P20615 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.65■□□□□ 0.1
Hoxb9P20615 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Hoxb9P20615 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxb9P20615 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hoxb9P20615 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms