Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Dancr-204ENSMUST00000132389 2347 ntBASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Gm27459-201ENSMUST00000184860 107 ntBASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf9P20334 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Gm8969-201ENSMUST00000199694 526 ntBASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf9P20334 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfrsf9P20334 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfrsf9P20334 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfrsf9P20334 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms