Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa6P09092 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxa6P09092 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxa6P09092 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxa6P09092 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxa6P09092 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Dancr-204ENSMUST00000132389 2347 ntBASIC14.04□□□□□ -0.16
Hoxa6P09092 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa6P09092 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxa6P09092 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.03□□□□□ -0.16
Hoxa6P09092 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxa6P09092 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.03□□□□□ -0.16
Hoxa6P09092 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa6P09092 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxa6P09092 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Hoxa6P09092 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa6P09092 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hoxa6P09092 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Gm44454-201ENSMUST00000198541 138 ntBASIC14.02□□□□□ -0.17
Hoxa6P09092 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.02□□□□□ -0.17
Hoxa6P09092 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.02□□□□□ -0.17
Hoxa6P09092 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa6P09092 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Gm28659-201ENSMUST00000188013 759 ntBASIC14.01□□□□□ -0.17
Hoxa6P09092 Gm43347-201ENSMUST00000200226 580 ntBASIC14.01□□□□□ -0.17
Hoxa6P09092 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxa6P09092 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa6P09092 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.01□□□□□ -0.17
Hoxa6P09092 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa6P09092 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.01□□□□□ -0.17
Hoxa6P09092 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa6P09092 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxa6P09092 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxa6P09092 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14□□□□□ -0.17
Hoxa6P09092 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14□□□□□ -0.17
Hoxa6P09092 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms