Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Col3a1P08121 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.39■□□□□ 0.69
Col3a1P08121 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col3a1P08121 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Col3a1P08121 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.38■□□□□ 0.69
Col3a1P08121 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.38■□□□□ 0.69
Col3a1P08121 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.38■□□□□ 0.69
Col3a1P08121 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.38■□□□□ 0.69
Col3a1P08121 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.38■□□□□ 0.69
Col3a1P08121 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.38■□□□□ 0.69
Col3a1P08121 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col3a1P08121 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col3a1P08121 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Gm11764-201ENSMUST00000120221 623 ntBASIC19.37■□□□□ 0.69
Col3a1P08121 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Haglr-201ENSMUST00000100000 2085 ntBASIC19.37■□□□□ 0.69
Col3a1P08121 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col3a1P08121 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col3a1P08121 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col3a1P08121 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Gm14140-201ENSMUST00000119999 995 ntBASIC19.36■□□□□ 0.69
Col3a1P08121 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Gm5682-201ENSMUST00000173402 505 ntBASIC19.36■□□□□ 0.69
Col3a1P08121 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.36■□□□□ 0.69
Col3a1P08121 Gm8000-201ENSMUST00000188378 592 ntBASIC19.36■□□□□ 0.69
Col3a1P08121 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.36■□□□□ 0.69
Col3a1P08121 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col3a1P08121 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col3a1P08121 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Gm27628-201ENSMUST00000184911 107 ntBASIC19.35■□□□□ 0.69
Col3a1P08121 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.35■□□□□ 0.69
Col3a1P08121 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.35■□□□□ 0.69
Col3a1P08121 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col3a1P08121 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col3a1P08121 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col3a1P08121 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.35■□□□□ 0.69
Col3a1P08121 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Col3a1P08121 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.35■□□□□ 0.69
Col3a1P08121 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 Gm15590-201ENSMUST00000078419 552 ntBASIC19.35■□□□□ 0.69
Col3a1P08121 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col3a1P08121 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col3a1P08121 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col3a1P08121 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col3a1P08121 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col3a1P08121 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms