Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04213 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04213 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.68■□□□□ 0.1
P04213 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04213 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
P04213 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.67■□□□□ 0.1
P04213 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P04213 Gm36967-201ENSMUST00000193814 266 ntBASIC15.67■□□□□ 0.1
P04213 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.67■□□□□ 0.1
P04213 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
P04213 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.67■□□□□ 0.1
P04213 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.67■□□□□ 0.1
P04213 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.67■□□□□ 0.1
P04213 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.67■□□□□ 0.1
P04213 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04213 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
P04213 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.66■□□□□ 0.1
P04213 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P04213 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P04213 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.66■□□□□ 0.1
P04213 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P04213 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P04213 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04213 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
P04213 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.65■□□□□ 0.1
P04213 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.65■□□□□ 0.1
P04213 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.65■□□□□ 0.1
P04213 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.65■□□□□ 0.1
P04213 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.65■□□□□ 0.1
P04213 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
P04213 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.65■□□□□ 0.1
P04213 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
P04213 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04213 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms