Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.14□□□□□ -0.15
Igh-VJ558P01758 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igh-VJ558P01758 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Gm10013-201ENSMUST00000106074 672 ntBASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.12□□□□□ -0.15
Igh-VJ558P01758 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms