Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.46■□□□□ 0.23
Sp1O89090 Mir8098-201ENSMUST00000184011 137 ntBASIC16.46■□□□□ 0.23
Sp1O89090 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.46■□□□□ 0.23
Sp1O89090 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sp1O89090 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.46■□□□□ 0.22
Sp1O89090 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sp1O89090 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sp1O89090 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Gm13884-201ENSMUST00000118103 829 ntBASIC16.45■□□□□ 0.22
Sp1O89090 Gm11452-201ENSMUST00000122376 690 ntBASIC16.45■□□□□ 0.22
Sp1O89090 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.45■□□□□ 0.22
Sp1O89090 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sp1O89090 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.44■□□□□ 0.22
Sp1O89090 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sp1O89090 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.44■□□□□ 0.22
Sp1O89090 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.44■□□□□ 0.22
Sp1O89090 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.44■□□□□ 0.22
Sp1O89090 Gm7506-201ENSMUST00000207758 815 ntBASIC16.44■□□□□ 0.22
Sp1O89090 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.44■□□□□ 0.22
Sp1O89090 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sp1O89090 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp1O89090 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.44■□□□□ 0.22
Sp1O89090 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.43■□□□□ 0.22
Sp1O89090 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sp1O89090 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.43■□□□□ 0.22
Sp1O89090 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.43■□□□□ 0.22
Sp1O89090 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.43■□□□□ 0.22
Sp1O89090 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sp1O89090 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.43■□□□□ 0.22
Sp1O89090 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sp1O89090 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sp1O89090 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp1O89090 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Sp1O89090 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp1O89090 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sp1O89090 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.42■□□□□ 0.22
Sp1O89090 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
Sp1O89090 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp1O89090 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp1O89090 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Sp1O89090 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sp1O89090 Mir6404-201ENSMUST00000183699 94 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sp1O89090 Gm44357-201ENSMUST00000195897 142 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm19658-201ENSMUST00000196231 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44367-201ENSMUST00000196836 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44350-201ENSMUST00000197197 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44390-201ENSMUST00000197533 144 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44313-201ENSMUST00000198018 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44486-201ENSMUST00000198508 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44314-201ENSMUST00000199263 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44394-201ENSMUST00000199558 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44484-201ENSMUST00000199873 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44466-201ENSMUST00000200264 138 ntBASIC16.42■□□□□ 0.22
Sp1O89090 Gm44359-201ENSMUST00000200671 138 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms