Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hdac3O88895 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.62□□□□□ -0.07
Hdac3O88895 Gm27000-201ENSMUST00000182943 842 ntBASIC14.62□□□□□ -0.07
Hdac3O88895 Gm10252-201ENSMUST00000209541 832 ntBASIC14.62□□□□□ -0.07
Hdac3O88895 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hdac3O88895 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hdac3O88895 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Hdac3O88895 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hdac3O88895 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hdac3O88895 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Hdac3O88895 Gm16061-201ENSMUST00000122167 857 ntBASIC14.61□□□□□ -0.07
Hdac3O88895 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hdac3O88895 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
Hdac3O88895 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Hdac3O88895 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hdac3O88895 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.61□□□□□ -0.07
Hdac3O88895 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Hdac3O88895 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hdac3O88895 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Hdac3O88895 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hdac3O88895 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.59□□□□□ -0.07
Hdac3O88895 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Gm13559-201ENSMUST00000120476 863 ntBASIC14.59□□□□□ -0.07
Hdac3O88895 Gm18958-201ENSMUST00000174258 762 ntBASIC14.59□□□□□ -0.07
Hdac3O88895 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.59□□□□□ -0.07
Hdac3O88895 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.59□□□□□ -0.07
Hdac3O88895 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hdac3O88895 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hdac3O88895 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hdac3O88895 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.58□□□□□ -0.08
Hdac3O88895 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms