Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Best1O88870 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Best1O88870 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Best1O88870 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Best1O88870 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Best1O88870 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.65■□□□□ 0.1
Best1O88870 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.65■□□□□ 0.1
Best1O88870 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.65■□□□□ 0.1
Best1O88870 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.65■□□□□ 0.1
Best1O88870 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.65■□□□□ 0.1
Best1O88870 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.65■□□□□ 0.1
Best1O88870 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Best1O88870 Gm7461-201ENSMUST00000058918 827 ntBASIC15.65■□□□□ 0.1
Best1O88870 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Best1O88870 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Best1O88870 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Best1O88870 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Best1O88870 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Best1O88870 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.64■□□□□ 0.09
Best1O88870 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.64■□□□□ 0.09
Best1O88870 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Best1O88870 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.64■□□□□ 0.09
Best1O88870 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Best1O88870 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Best1O88870 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.63■□□□□ 0.09
Best1O88870 Gm18195-201ENSMUST00000207604 706 ntBASIC15.63■□□□□ 0.09
Best1O88870 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Best1O88870 Gm6296-201ENSMUST00000222599 943 ntBASIC15.63■□□□□ 0.09
Best1O88870 Mzt1-203ENSMUST00000227948 952 ntBASIC15.63■□□□□ 0.09
Best1O88870 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Best1O88870 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Best1O88870 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Best1O88870 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Best1O88870 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.62■□□□□ 0.09
Best1O88870 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.62■□□□□ 0.09
Best1O88870 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Gm7506-201ENSMUST00000207758 815 ntBASIC15.62■□□□□ 0.09
Best1O88870 Gm6376-201ENSMUST00000209407 580 ntBASIC15.62■□□□□ 0.09
Best1O88870 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Best1O88870 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.62■□□□□ 0.09
Best1O88870 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Best1O88870 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Best1O88870 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.62■□□□□ 0.09
Best1O88870 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Best1O88870 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms