Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ShdO88834 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ShdO88834 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
ShdO88834 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShdO88834 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.7■□□□□ 0.26
ShdO88834 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.69■□□□□ 0.26
ShdO88834 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ShdO88834 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.69■□□□□ 0.26
ShdO88834 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.69■□□□□ 0.26
ShdO88834 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.69■□□□□ 0.26
ShdO88834 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ShdO88834 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ShdO88834 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.69■□□□□ 0.26
ShdO88834 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShdO88834 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.68■□□□□ 0.26
ShdO88834 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ShdO88834 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 AA414768-201ENSMUST00000121924 1257 ntBASIC16.68■□□□□ 0.26
ShdO88834 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ShdO88834 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Gm6345-202ENSMUST00000180900 204 ntBASIC16.68■□□□□ 0.26
ShdO88834 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ShdO88834 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.68■□□□□ 0.26
ShdO88834 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ShdO88834 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShdO88834 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.67■□□□□ 0.26
ShdO88834 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ShdO88834 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ShdO88834 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.67■□□□□ 0.26
ShdO88834 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.67■□□□□ 0.26
ShdO88834 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.67■□□□□ 0.26
ShdO88834 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.67■□□□□ 0.26
ShdO88834 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.67■□□□□ 0.26
ShdO88834 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShdO88834 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Gm36967-201ENSMUST00000193814 266 ntBASIC16.66■□□□□ 0.26
ShdO88834 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.66■□□□□ 0.26
ShdO88834 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.66■□□□□ 0.26
ShdO88834 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms