Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.04■□□□□ 0.32
Ttc3O88196 Gm4995-201ENSMUST00000117247 432 ntBASIC17.04■□□□□ 0.32
Ttc3O88196 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.04■□□□□ 0.32
Ttc3O88196 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.04■□□□□ 0.32
Ttc3O88196 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.04■□□□□ 0.32
Ttc3O88196 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ttc3O88196 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc3O88196 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Ttc3O88196 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ttc3O88196 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.03■□□□□ 0.32
Ttc3O88196 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.03■□□□□ 0.32
Ttc3O88196 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc3O88196 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Ttc3O88196 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Ttc3O88196 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ttc3O88196 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.02■□□□□ 0.32
Ttc3O88196 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Gm13418-201ENSMUST00000119097 944 ntBASIC17.02■□□□□ 0.32
Ttc3O88196 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.02■□□□□ 0.32
Ttc3O88196 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.02■□□□□ 0.32
Ttc3O88196 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.02■□□□□ 0.32
Ttc3O88196 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.02■□□□□ 0.32
Ttc3O88196 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc3O88196 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc3O88196 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc3O88196 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.02■□□□□ 0.31
Ttc3O88196 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.02■□□□□ 0.31
Ttc3O88196 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc3O88196 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc3O88196 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc3O88196 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ttc3O88196 Gm13216-201ENSMUST00000117145 591 ntBASIC17.01■□□□□ 0.31
Ttc3O88196 Gm11779-201ENSMUST00000118541 368 ntBASIC17.01■□□□□ 0.31
Ttc3O88196 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ttc3O88196 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.01■□□□□ 0.31
Ttc3O88196 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ttc3O88196 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc3O88196 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17■□□□□ 0.31
Ttc3O88196 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17■□□□□ 0.31
Ttc3O88196 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ttc3O88196 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ttc3O88196 Gm26596-201ENSMUST00000180464 2655 ntBASIC17■□□□□ 0.31
Ttc3O88196 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17■□□□□ 0.31
Ttc3O88196 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ttc3O88196 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ttc3O88196 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17■□□□□ 0.31
Ttc3O88196 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 AC084391.1-201ENSMUST00000200651 141 ntBASIC17■□□□□ 0.31
Ttc3O88196 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc3O88196 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms