Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.49■□□□□ 0.07
Rdh5O55240 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.49■□□□□ 0.07
Rdh5O55240 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.49■□□□□ 0.07
Rdh5O55240 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rdh5O55240 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rdh5O55240 Gm7367-201ENSMUST00000057611 492 ntBASIC15.48■□□□□ 0.07
Rdh5O55240 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.48■□□□□ 0.07
Rdh5O55240 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rdh5O55240 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rdh5O55240 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh5O55240 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.47■□□□□ 0.07
Rdh5O55240 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.47■□□□□ 0.07
Rdh5O55240 Gm37722-201ENSMUST00000193757 208 ntBASIC15.47■□□□□ 0.07
Rdh5O55240 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.47■□□□□ 0.07
Rdh5O55240 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.47■□□□□ 0.07
Rdh5O55240 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.47■□□□□ 0.07
Rdh5O55240 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rdh5O55240 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rdh5O55240 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rdh5O55240 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Rdh5O55240 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.46■□□□□ 0.07
Rdh5O55240 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.46■□□□□ 0.07
Rdh5O55240 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Rdh5O55240 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rdh5O55240 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh5O55240 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh5O55240 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rdh5O55240 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rdh5O55240 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rdh5O55240 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rdh5O55240 Gm11355-201ENSMUST00000121120 306 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms