Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Clk4O35493 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gm11336-201ENSMUST00000118168 334 ntBASIC15.69■□□□□ 0.1
Clk4O35493 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Clk4O35493 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gm23634-201ENSMUST00000175071 91 ntBASIC15.69■□□□□ 0.1
Clk4O35493 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Clk4O35493 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk4O35493 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.69■□□□□ 0.1
Clk4O35493 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Clk4O35493 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.68■□□□□ 0.1
Clk4O35493 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk4O35493 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Clk4O35493 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clk4O35493 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk4O35493 Gm29707-201ENSMUST00000196325 491 ntBASIC15.68■□□□□ 0.1
Clk4O35493 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.68■□□□□ 0.1
Clk4O35493 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Clk4O35493 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk4O35493 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.68■□□□□ 0.1
Clk4O35493 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clk4O35493 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk4O35493 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.67■□□□□ 0.1
Clk4O35493 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk4O35493 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk4O35493 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.67■□□□□ 0.1
Clk4O35493 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 AA414768-201ENSMUST00000121924 1257 ntBASIC15.67■□□□□ 0.1
Clk4O35493 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk4O35493 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clk4O35493 Gm44450-201ENSMUST00000199528 114 ntBASIC15.67■□□□□ 0.1
Clk4O35493 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk4O35493 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clk4O35493 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Phf7-203ENSMUST00000226565 1971 ntBASIC15.66■□□□□ 0.1
Clk4O35493 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Clk4O35493 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Clk4O35493 Gm37722-201ENSMUST00000193757 208 ntBASIC15.66■□□□□ 0.1
Clk4O35493 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk4O35493 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms