Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm38114-201ENSMUST00000191877 1232 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 Gm7977-201ENSMUST00000193787 748 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Gm42545-201ENSMUST00000202755 922 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Clcn6O35454 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.52■□□□□ 0.4
Clcn6O35454 Vmn1r89-206ENSMUST00000227319 985 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn6O35454 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn6O35454 Gm14667-201ENSMUST00000119448 1350 ntBASIC17.52■□□□□ 0.39
Clcn6O35454 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn6O35454 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Clcn6O35454 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.51■□□□□ 0.39
Clcn6O35454 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Gm18666-201ENSMUST00000190039 958 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 Gm43489-201ENSMUST00000196810 993 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 Gm43084-201ENSMUST00000200696 947 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 Gm10252-201ENSMUST00000209541 832 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 Gm18025-201ENSMUST00000221733 862 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 CT025538.2-201ENSMUST00000226083 772 ntBASIC17.51■□□□□ 0.39
Clcn6O35454 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn6O35454 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Clcn6O35454 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.5■□□□□ 0.39
Clcn6O35454 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.5■□□□□ 0.39
Clcn6O35454 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC17.5■□□□□ 0.39
Clcn6O35454 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 AC165260.5-201ENSMUST00000224640 1247 ntBASIC17.5■□□□□ 0.39
Clcn6O35454 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn6O35454 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn6O35454 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clcn6O35454 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Gm13255-201ENSMUST00000117255 547 ntBASIC17.49■□□□□ 0.39
Clcn6O35454 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.49■□□□□ 0.39
Clcn6O35454 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC17.49■□□□□ 0.39
Clcn6O35454 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC17.49■□□□□ 0.39
Clcn6O35454 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clcn6O35454 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.49■□□□□ 0.39
Clcn6O35454 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC17.49■□□□□ 0.39
Clcn6O35454 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Clcn6O35454 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.49■□□□□ 0.39
Clcn6O35454 Zmym2-202ENSMUST00000223669 1281 ntBASIC17.49■□□□□ 0.39
Clcn6O35454 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn6O35454 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Clcn6O35454 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms