Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.5■□□□□ 0.39
Usp35M0QWN7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Olfr129-201ENSMUST00000122318 993 ntBASIC17.49■□□□□ 0.39
Usp35M0QWN7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp35M0QWN7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp35M0QWN7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Gm13186-201ENSMUST00000118031 316 ntBASIC17.48■□□□□ 0.39
Usp35M0QWN7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.48■□□□□ 0.39
Usp35M0QWN7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp35M0QWN7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Gm15794-201ENSMUST00000120182 631 ntBASIC17.47■□□□□ 0.39
Usp35M0QWN7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp35M0QWN7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.46■□□□□ 0.39
Usp35M0QWN7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp35M0QWN7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp35M0QWN7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp35M0QWN7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp35M0QWN7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Gm18115-201ENSMUST00000221209 621 ntBASIC17.45■□□□□ 0.38
Usp35M0QWN7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms