Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim55G3X8Y1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Gm7291-201ENSMUST00000199147 382 ntBASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim55G3X8Y1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim55G3X8Y1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim55G3X8Y1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim55G3X8Y1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim55G3X8Y1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Gm29257-201ENSMUST00000186115 639 ntBASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim55G3X8Y1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim55G3X8Y1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms