Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm12490-201ENSMUST00000120255 560 ntBASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm38294-201ENSMUST00000192831 381 ntBASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm10253-201ENSMUST00000194270 940 ntBASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ccdc188F6WEU2 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.46■□□□□ 0.22
Ccdc188F6WEU2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc188F6WEU2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc188F6WEU2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc188F6WEU2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm6007-201ENSMUST00000208170 823 ntBASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm5779-201ENSMUST00000218467 910 ntBASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc188F6WEU2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22065-201ENSMUST00000103753 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22066-201ENSMUST00000103761 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24932-201ENSMUST00000103763 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24115-201ENSMUST00000103799 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22190-201ENSMUST00000103827 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22191-201ENSMUST00000103831 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24721-201ENSMUST00000103849 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm28018-201ENSMUST00000103869 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm26399-201ENSMUST00000103937 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25349-201ENSMUST00000177728 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm23616-201ENSMUST00000177797 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25871-201ENSMUST00000177816 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24752-201ENSMUST00000178240 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24496-201ENSMUST00000178287 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25649-201ENSMUST00000178476 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25548-201ENSMUST00000178681 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm23147-201ENSMUST00000178841 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm26095-201ENSMUST00000179270 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22171-201ENSMUST00000179283 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm23936-201ENSMUST00000179354 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm22619-201ENSMUST00000179516 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25255-201ENSMUST00000179579 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24755-201ENSMUST00000179691 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm26506-201ENSMUST00000179692 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm25086-201ENSMUST00000179931 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm23243-201ENSMUST00000180047 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24659-201ENSMUST00000180212 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm24169-201ENSMUST00000180244 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm23689-201ENSMUST00000180354 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm27359-201ENSMUST00000184153 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm27785-201ENSMUST00000184268 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm27466-201ENSMUST00000184396 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm27703-201ENSMUST00000184836 110 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc188F6WEU2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms