Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube4aE9Q735 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube4aE9Q735 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube4aE9Q735 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4aE9Q735 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.58■□□□□ 0.72
Ube4aE9Q735 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4aE9Q735 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4aE9Q735 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.57■□□□□ 0.72
Ube4aE9Q735 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Psmb5-202ENSMUST00000227257 622 ntBASIC19.57■□□□□ 0.72
Ube4aE9Q735 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Gm15590-201ENSMUST00000078419 552 ntBASIC19.57■□□□□ 0.72
Ube4aE9Q735 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.57■□□□□ 0.72
Ube4aE9Q735 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4aE9Q735 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4aE9Q735 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.55■□□□□ 0.72
Ube4aE9Q735 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ube4aE9Q735 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.55■□□□□ 0.72
Ube4aE9Q735 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4aE9Q735 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Gm8000-201ENSMUST00000188378 592 ntBASIC19.54■□□□□ 0.72
Ube4aE9Q735 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4aE9Q735 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.53■□□□□ 0.72
Ube4aE9Q735 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm37935-201ENSMUST00000192012 982 ntBASIC19.53■□□□□ 0.72
Ube4aE9Q735 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.53■□□□□ 0.72
Ube4aE9Q735 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4aE9Q735 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms